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function script_run_profile(dataDir, resultDir, type, common,toolDir)
mser_compile;
path(path, common);
% MSER_DEMO Demonstrates MSER
% AUTORIGHTS
% Copyright (C) 2006 Regents of the University of California
% All rights reserved
%
% Written by Andrea Vedaldi (UCLA VisionLab).
%
% Redistribution and use in source and binary forms, with or without
% modification, are permitted provided that the following conditions are met
%
% * Redistributions of source code must retain the above copyright
% notice, this list of conditions and the following disclaimer.
% * Redistributions in binary form must reproduce the above copyright
% notice, this list of conditions and the following disclaimer in the
% documentation and/or other materials provided with the distribution.
% * Neither the name of the University of California, Berkeley nor the
% names of its contributors may be used to endorse or promote products
% derived from this software without specific prior written permission.
%
% THIS SOFTWARE IS PROVIDED BY THE REGENTS AND CONTRIBUTORS ``AS IS'' AND ANY
% EXPRESS OR IMPLIED WARRANTIES, INCLUDING, BUT NOT LIMITED TO, THE IMPLIED
% WARRANTIES OF MERCHANTABILITY AND FITNESS FOR A PARTICULAR PURPOSE ARE
% DISCLAIMED. IN NO EVENT SHALL THE REGENTS AND CONTRIBUTORS BE LIABLE FOR ANY
% DIRECT, INDIRECT, INCIDENTAL, SPECIAL, EXEMPLARY, OR CONSEQUENTIAL DAMAGES
% (INCLUDING, BUT NOT LIMITED TO, PROCUREMENT OF SUBSTITUTE GOODS OR SERVICES;
% LOSS OF USE, DATA, OR PROFITS; OR BUSINESS INTERRUPTION) HOWEVER CAUSED AND
% ON ANY THEORY OF LIABILITY, WHETHER IN CONTRACT, STRICT LIABILITY, OR TORT
% (INCLUDING NEGLIGENCE OR OTHERWISE) ARISING IN ANY WAY OUT OF THE USE OF THIS
% SOFTWARE, EVEN IF ADVISED OF THE POSSIBILITY OF SUCH DAMAGE.
which_image = 3 ;
% --------------------------------------------------------------------
% Create data
% --------------------------------------------------------------------
switch which_image
case 1
I = rand(200,200) ;
I = imsmooth(I,10) ;
I = I-min(I(:)) ;
I = I/max(I(:)) ;
lev = 10 ;
I = uint8(round(I*lev)) ;
case 2
I = zeros(200,200) ;
I(50:150,50:150)=5 ;
I = imsmooth(I,10) ;
I = uint8(round(I)) ;
case 3
Files = dir([dataDir,'/1.bmp']);
I=readImage(fullfile(dataDir,Files(1).name));
end
% --------------------------------------------------------------------
% Compute MSERs
% --------------------------------------------------------------------
%% Self check params
tol = 0.1;
elapsed = zeros(1,2);
rows = size(I,1);
cols = size(I,2);
fprintf(1,'Input size\t\t- (%dx%d)\n', rows, cols);
%% Timing
start = photonStartTiming;
[idx] = mser(uint8(I), 2) ;
%% Timing
stop = photonEndTiming;
temp = photonReportTiming(start, stop);
elapsed(1) = elapsed(1) + temp(1);
elapsed(2) = elapsed(2) + temp(2);
%% Self checking
writeMatrix(idx, dataDir);
%% Timing
photonPrintTiming(elapsed);
%% --------------------------------------------------------------------
%% Plots
%% --------------------------------------------------------------------
%[i,j] = ind2sub(size(I),idx) ;
%
%figure(100) ; clf ; imagesc(I) ; hold on ;
%set(gca,'Position',[0 0 1 1]) ;
%plot(j,i,'g*') ; colormap gray ;
%
%% swap x with y
%ell = ell([2 1 5 4 3],:) ;
%
%for k=1:size(ell,2)
% E = ell(:,k) ;
% c = E(1:2) ;
% A = zeros(2) ;
% A(1,1) = E(3) ;
% A(1,2) = E(4) ;
% A(2,2) = E(5) ;
% A = A + A' - diag(diag(A)) ;
%
% [V,D] = eig(A) ;
% A = 2.5*V*sqrt(D) ;
%
% X = A*[cos(linspace(0,2*pi,30)) ; sin(linspace(0,2*pi,30)) ;] ;
% X(1,:) = X(1,:) + c(1) ;
% X(2,:) = X(2,:) + c(2) ;
%
% plot(X(1,:),X(2,:),'r-','LineWidth',2) ;
% plot(c(1),c(2),'r.') ;
% plot(j(k),i(k),'g*') ;
%end
%
%line([j'; ell(1,:)],[i'; ell(2,:)],'color','b') ;
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